Bioinformatics Services
Some services offered are:
- Custom bioinformatics pipeline development
- Optimization of existing NGS/bioinformatics pipeline
- Optimization of targeted sequencing panel analysis
- Optimization of Ion Torrent data workflow systems
- Onboarding of new cloud/high-performance technologies into data workflow
Next-Generation Sequencing Bioinformatics Pipelines
All pipelines described below ingest data in the standard formats such as BAM/CRAM/FASTQ.
- Whole-exome sequencing variant calling
- Whole-exome sequencing tumor-normal variant pipeline
- Whole-genome (WGS) alignment and variant calling
- Sequencing-based determination of ancestry/gender (Consumer Genomics)
- RNA-Seq expression
- RNA-Seq gene fusion
- Targeted amplicon Illumine
- Targeted panel Ion Torrent AmpliSeq
Data Analytics
Some services offered are:
- Development of data analysis pipelines for large data loads
- Migration of on-premise workloads (data,compute) to the cloud
- Model-building and application using R/python tools
- Establishment of data models and database systems (Hadoop/PostgreSQL/MySQL)
- Custom dashboard development with R or Python